Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.17□□□□□ -0.46
P04213 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
P04213 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
P04213 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
P04213 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
P04213 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.16□□□□□ -0.46
P04213 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Gm4768-201ENSMUST00000206199 686 ntBASIC12.16□□□□□ -0.46
P04213 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
P04213 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
P04213 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
P04213 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.16□□□□□ -0.46
P04213 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P04213 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.15□□□□□ -0.46
P04213 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.15□□□□□ -0.46
P04213 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.15□□□□□ -0.46
P04213 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
P04213 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
P04213 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
P04213 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.15□□□□□ -0.46
P04213 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Gm16177-201ENSMUST00000120728 718 ntBASIC12.15□□□□□ -0.46
P04213 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.15□□□□□ -0.46
P04213 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.15□□□□□ -0.46
P04213 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.15□□□□□ -0.46
P04213 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.15□□□□□ -0.46
P04213 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P04213 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P04213 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P04213 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
P04213 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
P04213 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P04213 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P04213 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04213 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04213 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04213 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P04213 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
P04213 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04213 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04213 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
P04213 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P04213 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P04213 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.14□□□□□ -0.47
P04213 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
P04213 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms