Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
P01788 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P01788 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P01788 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P01788 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P01788 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
P01788 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
P01788 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.02□□□□□ -0.81
P01788 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
P01788 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
P01788 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.02□□□□□ -0.81
P01788 Gm44397-201ENSMUST00000195950 113 ntBASIC10.02□□□□□ -0.81
P01788 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.02□□□□□ -0.81
P01788 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.02□□□□□ -0.81
P01788 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.02□□□□□ -0.81
P01788 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
P01788 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
P01788 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.02□□□□□ -0.81
P01788 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
P01788 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
P01788 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.02□□□□□ -0.81
P01788 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
P01788 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P01788 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.01□□□□□ -0.81
P01788 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
P01788 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
P01788 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.01□□□□□ -0.81
P01788 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.01□□□□□ -0.81
P01788 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
P01788 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
P01788 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
P01788 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
P01788 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
P01788 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Gm5687-201ENSMUST00000118252 640 ntBASIC10.01□□□□□ -0.81
P01788 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.01□□□□□ -0.81
P01788 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.01□□□□□ -0.81
P01788 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.01□□□□□ -0.81
P01788 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.01□□□□□ -0.81
P01788 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
P01788 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
P01788 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.01□□□□□ -0.81
P01788 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
P01788 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.01□□□□□ -0.81
P01788 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
P01788 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
P01788 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms