Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.81□□□□□ -0.36
Chrna4O70174 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Chrna4O70174 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Chrna4O70174 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.81□□□□□ -0.36
Chrna4O70174 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chrna4O70174 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chrna4O70174 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chrna4O70174 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Chrna4O70174 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Chrna4O70174 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Chrna4O70174 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chrna4O70174 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.8□□□□□ -0.36
Chrna4O70174 Gm7809-201ENSMUST00000153199 742 ntBASIC12.8□□□□□ -0.36
Chrna4O70174 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.8□□□□□ -0.36
Chrna4O70174 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chrna4O70174 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Chrna4O70174 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.8□□□□□ -0.36
Chrna4O70174 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Snora73a-201ENSMUST00000082453 205 ntBASIC12.8□□□□□ -0.36
Chrna4O70174 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.8□□□□□ -0.36
Chrna4O70174 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chrna4O70174 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Chrna4O70174 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Chrna4O70174 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chrna4O70174 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chrna4O70174 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.79□□□□□ -0.36
Chrna4O70174 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chrna4O70174 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chrna4O70174 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Gm23931-201ENSMUST00000103842 109 ntBASIC12.79□□□□□ -0.36
Chrna4O70174 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.79□□□□□ -0.36
Chrna4O70174 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.79□□□□□ -0.36
Chrna4O70174 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Chrna4O70174 Gm12502-201ENSMUST00000120197 444 ntBASIC12.79□□□□□ -0.36
Chrna4O70174 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.79□□□□□ -0.36
Chrna4O70174 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.79□□□□□ -0.36
Chrna4O70174 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chrna4O70174 Gm3890-201ENSMUST00000182416 207 ntBASIC12.79□□□□□ -0.36
Chrna4O70174 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chrna4O70174 Gm24526-201ENSMUST00000082921 158 ntBASIC12.79□□□□□ -0.36
Chrna4O70174 Gm26035-201ENSMUST00000083065 308 ntBASIC12.79□□□□□ -0.36
Chrna4O70174 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.79□□□□□ -0.36
Chrna4O70174 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.79□□□□□ -0.36
Chrna4O70174 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chrna4O70174 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.79□□□□□ -0.36
Chrna4O70174 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chrna4O70174 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chrna4O70174 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chrna4O70174 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chrna4O70174 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Chrna4O70174 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chrna4O70174 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.78□□□□□ -0.36
Chrna4O70174 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chrna4O70174 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms