Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.46□□□□□ -0.25
Itgb3O54890 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Itgb3O54890 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Itgb3O54890 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Itgb3O54890 Gm11531-201ENSMUST00000117614 555 ntBASIC13.46□□□□□ -0.25
Itgb3O54890 Gm13736-201ENSMUST00000119272 253 ntBASIC13.46□□□□□ -0.25
Itgb3O54890 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Itgb3O54890 Gm8018-201ENSMUST00000173536 789 ntBASIC13.46□□□□□ -0.25
Itgb3O54890 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.46□□□□□ -0.25
Itgb3O54890 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.46□□□□□ -0.25
Itgb3O54890 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Itgb3O54890 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.46□□□□□ -0.25
Itgb3O54890 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.46□□□□□ -0.25
Itgb3O54890 Gm30285-201ENSMUST00000214614 422 ntBASIC13.46□□□□□ -0.25
Itgb3O54890 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.46□□□□□ -0.25
Itgb3O54890 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.46□□□□□ -0.25
Itgb3O54890 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.46□□□□□ -0.25
Itgb3O54890 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Itgb3O54890 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Itgb3O54890 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Itgb3O54890 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Itgb3O54890 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Itgb3O54890 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Itgb3O54890 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Itgb3O54890 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Itgb3O54890 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.46□□□□□ -0.26
Itgb3O54890 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.46□□□□□ -0.26
Itgb3O54890 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Itgb3O54890 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Itgb3O54890 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Itgb3O54890 Rubie-203ENSMUST00000227803 2430 ntBASIC13.45□□□□□ -0.26
Itgb3O54890 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Itgb3O54890 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Itgb3O54890 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Itgb3O54890 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Gm11222-201ENSMUST00000119005 738 ntBASIC13.45□□□□□ -0.26
Itgb3O54890 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.45□□□□□ -0.26
Itgb3O54890 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.45□□□□□ -0.26
Itgb3O54890 Gm26956-201ENSMUST00000182176 986 ntBASIC13.45□□□□□ -0.26
Itgb3O54890 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Itgb3O54890 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Itgb3O54890 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Itgb3O54890 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.45□□□□□ -0.26
Itgb3O54890 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Itgb3O54890 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.45□□□□□ -0.26
Itgb3O54890 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Itgb3O54890 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.44□□□□□ -0.26
Itgb3O54890 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.44□□□□□ -0.26
Itgb3O54890 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.44□□□□□ -0.26
Itgb3O54890 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Itgb3O54890 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Gm24255-201ENSMUST00000104481 128 ntBASIC13.44□□□□□ -0.26
Itgb3O54890 Gm25214-201ENSMUST00000104573 129 ntBASIC13.44□□□□□ -0.26
Itgb3O54890 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Itgb3O54890 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.44□□□□□ -0.26
Itgb3O54890 Gm12058-201ENSMUST00000118614 437 ntBASIC13.44□□□□□ -0.26
Itgb3O54890 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.44□□□□□ -0.26
Itgb3O54890 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.44□□□□□ -0.26
Itgb3O54890 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.44□□□□□ -0.26
Itgb3O54890 Gm5950-201ENSMUST00000213337 772 ntBASIC13.44□□□□□ -0.26
Itgb3O54890 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.44□□□□□ -0.26
Itgb3O54890 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.44□□□□□ -0.26
Itgb3O54890 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.44□□□□□ -0.26
Itgb3O54890 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Itgb3O54890 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Itgb3O54890 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Itgb3O54890 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms