Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC9.22□□□□□ -0.93
CrxO54751 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC9.22□□□□□ -0.93
CrxO54751 Gm9727-201ENSMUST00000161387 555 ntBASIC9.22□□□□□ -0.93
CrxO54751 Gm18737-201ENSMUST00000173594 937 ntBASIC9.22□□□□□ -0.93
CrxO54751 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.22□□□□□ -0.93
CrxO54751 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.22□□□□□ -0.93
CrxO54751 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.22□□□□□ -0.93
CrxO54751 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC9.22□□□□□ -0.93
CrxO54751 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.22□□□□□ -0.93
CrxO54751 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
CrxO54751 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
CrxO54751 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.22□□□□□ -0.93
CrxO54751 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
CrxO54751 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
CrxO54751 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
CrxO54751 AC131586.3-201ENSMUST00000228355 1367 ntBASIC9.22□□□□□ -0.93
CrxO54751 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
CrxO54751 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
CrxO54751 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.22□□□□□ -0.93
CrxO54751 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CrxO54751 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
CrxO54751 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
CrxO54751 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CrxO54751 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CrxO54751 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.21□□□□□ -0.93
CrxO54751 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CrxO54751 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CrxO54751 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
CrxO54751 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CrxO54751 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.21□□□□□ -0.93
CrxO54751 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
CrxO54751 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
CrxO54751 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
CrxO54751 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CrxO54751 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CrxO54751 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
CrxO54751 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CrxO54751 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC9.21□□□□□ -0.94
CrxO54751 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Mir8117-201ENSMUST00000184773 107 ntBASIC9.21□□□□□ -0.94
CrxO54751 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.21□□□□□ -0.94
CrxO54751 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.21□□□□□ -0.94
CrxO54751 Mzt1-203ENSMUST00000227948 952 ntBASIC9.21□□□□□ -0.94
CrxO54751 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC9.21□□□□□ -0.94
CrxO54751 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
CrxO54751 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
CrxO54751 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
CrxO54751 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
CrxO54751 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
CrxO54751 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.21□□□□□ -0.94
CrxO54751 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
CrxO54751 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
CrxO54751 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CrxO54751 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms