Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.5□□□□□ -0.41
Slc1a6O35544 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.5□□□□□ -0.41
Slc1a6O35544 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.5□□□□□ -0.41
Slc1a6O35544 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.5□□□□□ -0.41
Slc1a6O35544 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.5□□□□□ -0.41
Slc1a6O35544 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.5□□□□□ -0.41
Slc1a6O35544 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc1a6O35544 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.5□□□□□ -0.41
Slc1a6O35544 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Slc1a6O35544 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc1a6O35544 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc1a6O35544 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Slc1a6O35544 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc1a6O35544 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.49□□□□□ -0.41
Slc1a6O35544 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc1a6O35544 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.49□□□□□ -0.41
Slc1a6O35544 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Slc1a6O35544 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.49□□□□□ -0.41
Slc1a6O35544 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.49□□□□□ -0.41
Slc1a6O35544 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Slc1a6O35544 Gm42612-201ENSMUST00000197986 623 ntBASIC12.49□□□□□ -0.41
Slc1a6O35544 Gm43170-201ENSMUST00000199827 612 ntBASIC12.49□□□□□ -0.41
Slc1a6O35544 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc1a6O35544 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc1a6O35544 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.49□□□□□ -0.41
Slc1a6O35544 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Slc1a6O35544 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc1a6O35544 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc1a6O35544 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Slc1a6O35544 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc1a6O35544 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.48□□□□□ -0.41
Slc1a6O35544 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc1a6O35544 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc1a6O35544 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc1a6O35544 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc1a6O35544 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Slc1a6O35544 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Slc1a6O35544 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms