Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.08■□□□□ 0
Hdac1O09106 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.08■□□□□ 0
Hdac1O09106 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.08■□□□□ 0
Hdac1O09106 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hdac1O09106 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.08■□□□□ 0
Hdac1O09106 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Hdac1O09106 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.08■□□□□ 0
Hdac1O09106 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Hdac1O09106 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.08■□□□□ 0
Hdac1O09106 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.08■□□□□ 0
Hdac1O09106 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.08■□□□□ 0
Hdac1O09106 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hdac1O09106 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Hdac1O09106 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.07■□□□□ 0
Hdac1O09106 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.07■□□□□ 0
Hdac1O09106 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hdac1O09106 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.07■□□□□ 0
Hdac1O09106 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.07■□□□□ 0
Hdac1O09106 Gm8213-201ENSMUST00000118191 441 ntBASIC15.07■□□□□ 0
Hdac1O09106 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.07■□□□□ 0
Hdac1O09106 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.07■□□□□ 0
Hdac1O09106 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.07■□□□□ 0
Hdac1O09106 Gm45668-201ENSMUST00000211271 493 ntBASIC15.07■□□□□ 0
Hdac1O09106 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Gm15823-201ENSMUST00000064305 670 ntBASIC15.07■□□□□ 0
Hdac1O09106 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Hdac1O09106 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Hdac1O09106 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hdac1O09106 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Hdac1O09106 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.07■□□□□ 0
Hdac1O09106 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.07■□□□□ 0
Hdac1O09106 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hdac1O09106 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.06■□□□□ 0
Hdac1O09106 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Gm43321-201ENSMUST00000198897 2409 ntBASIC15.06■□□□□ 0
Hdac1O09106 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC15.06■□□□□ 0
Hdac1O09106 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Gm37922-201ENSMUST00000195596 455 ntBASIC15.06■□□□□ 0
Hdac1O09106 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.06■□□□□ 0
Hdac1O09106 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.06■□□□□ 0
Hdac1O09106 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.06■□□□□ 0
Hdac1O09106 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hdac1O09106 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hdac1O09106 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.06■□□□□ 0
Hdac1O09106 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hdac1O09106 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms