Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sec22bO08547 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.56□□□□□ -0.4
Sec22bO08547 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Sec22bO08547 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.56□□□□□ -0.4
Sec22bO08547 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Mir339-201ENSMUST00000083659 96 ntBASIC12.56□□□□□ -0.4
Sec22bO08547 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.56□□□□□ -0.4
Sec22bO08547 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.56□□□□□ -0.4
Sec22bO08547 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.56□□□□□ -0.4
Sec22bO08547 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sec22bO08547 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sec22bO08547 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Sec22bO08547 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec22bO08547 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sec22bO08547 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.55□□□□□ -0.4
Sec22bO08547 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sec22bO08547 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sec22bO08547 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sec22bO08547 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.55□□□□□ -0.4
Sec22bO08547 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sec22bO08547 Gm9002-201ENSMUST00000178437 499 ntBASIC12.55□□□□□ -0.4
Sec22bO08547 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.55□□□□□ -0.4
Sec22bO08547 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.55□□□□□ -0.4
Sec22bO08547 Gm9794-201ENSMUST00000202370 423 ntBASIC12.55□□□□□ -0.4
Sec22bO08547 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.55□□□□□ -0.4
Sec22bO08547 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.55□□□□□ -0.4
Sec22bO08547 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.55□□□□□ -0.4
Sec22bO08547 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.55□□□□□ -0.4
Sec22bO08547 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sec22bO08547 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sec22bO08547 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sec22bO08547 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Sec22bO08547 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sec22bO08547 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sec22bO08547 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sec22bO08547 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Cog3-203ENSMUST00000227473 4197 ntBASIC12.54□□□□□ -0.4
Sec22bO08547 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sec22bO08547 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Gm12203-201ENSMUST00000118235 598 ntBASIC12.54□□□□□ -0.4
Sec22bO08547 Gm12209-201ENSMUST00000120089 596 ntBASIC12.54□□□□□ -0.4
Sec22bO08547 Gm16479-201ENSMUST00000121706 932 ntBASIC12.54□□□□□ -0.4
Sec22bO08547 Gm2231-201ENSMUST00000125661 612 ntBASIC12.54□□□□□ -0.4
Sec22bO08547 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.54□□□□□ -0.4
Sec22bO08547 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sec22bO08547 Gm17208-201ENSMUST00000168388 535 ntBASIC12.54□□□□□ -0.4
Sec22bO08547 Gm8652-201ENSMUST00000181363 964 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms