Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Mir698-201ENSMUST00000102164 109 ntBASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Gm13597-201ENSMUST00000121239 375 ntBASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Gm27301-201ENSMUST00000184012 127 ntBASIC13.03□□□□□ -0.32
Trim55G3X8Y1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim55G3X8Y1 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim55G3X8Y1 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim55G3X8Y1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim55G3X8Y1 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Trim55G3X8Y1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim55G3X8Y1 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Trim55G3X8Y1 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim55G3X8Y1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.02□□□□□ -0.33
Trim55G3X8Y1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim55G3X8Y1 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.01□□□□□ -0.33
Trim55G3X8Y1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim55G3X8Y1 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms