Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Mir698-201ENSMUST00000102164 109 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm14350-201ENSMUST00000116642 640 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm11801-201ENSMUST00000117807 746 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm10051-201ENSMUST00000145209 414 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Scgb2b1-201ENSMUST00000189372 338 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm34023-201ENSMUST00000195539 217 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm8913-201ENSMUST00000209491 641 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm45889-201ENSMUST00000209535 1057 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 AC140375.1-201ENSMUST00000225421 694 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 AC140451.2-202ENSMUST00000226156 574 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Olfr844-201ENSMUST00000054106 930 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm10076-201ENSMUST00000073238 384 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Krtap6-3-201ENSMUST00000079151 444 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx1-1G3UXB3 Gm19337-201ENSMUST00000218100 1584 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 AC079245.1-201ENSMUST00000215680 1454 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm22543-201ENSMUST00000104347 94 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm25214-201ENSMUST00000104573 129 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm2877-201ENSMUST00000178248 1204 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm8324-201ENSMUST00000178911 1204 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm5309-201ENSMUST00000197416 677 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm43610-201ENSMUST00000199117 365 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms