Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Gm10268-201ENSMUST00000085340 555 ntBASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.03□□□□□ -0.16
Pcdh11xF6ZNL5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
Pcdh11xF6ZNL5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh11xF6ZNL5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh11xF6ZNL5 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.02□□□□□ -0.16
Pcdh11xF6ZNL5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh11xF6ZNL5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh11xF6ZNL5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.02□□□□□ -0.16
Pcdh11xF6ZNL5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh11xF6ZNL5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.02□□□□□ -0.16
Pcdh11xF6ZNL5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh11xF6ZNL5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Gm27572-201ENSMUST00000183702 255 ntBASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Gm6013-201ENSMUST00000212264 699 ntBASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh11xF6ZNL5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Gm19184-201ENSMUST00000196798 928 ntBASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdh11xF6ZNL5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms