Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Srp54bE9PXC0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gm44967-201ENSMUST00000207047 631 ntBASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gm5363-201ENSMUST00000211927 938 ntBASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Srp54bE9PXC0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm13736-201ENSMUST00000119272 253 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm25043-201ENSMUST00000158604 212 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm27046-201ENSMUST00000182160 463 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm3096-201ENSMUST00000185770 364 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm37201-201ENSMUST00000191845 523 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms