Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm22711-201ENSMUST00000116890 133 ntBASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.34□□□□□ -0.59
Sptbn4E9PX29 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm37852-201ENSMUST00000193027 350 ntBASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gm5870-201ENSMUST00000196461 282 ntBASIC11.34□□□□□ -0.59
Sptbn4E9PX29 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sptbn4E9PX29 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Sptbn4E9PX29 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sptbn4E9PX29 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Gm24891-201ENSMUST00000104391 136 ntBASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Gm13315-201ENSMUST00000120376 991 ntBASIC11.33□□□□□ -0.6
Sptbn4E9PX29 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Gm19587-201ENSMUST00000191395 545 ntBASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.33□□□□□ -0.6
Sptbn4E9PX29 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sptbn4E9PX29 Gm14193-201ENSMUST00000105067 153 ntBASIC11.32□□□□□ -0.6
Sptbn4E9PX29 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Sptbn4E9PX29 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.32□□□□□ -0.6
Sptbn4E9PX29 Gm8343-201ENSMUST00000182705 994 ntBASIC11.32□□□□□ -0.6
Sptbn4E9PX29 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms