Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm22189-201ENSMUST00000103822 86 ntBASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm44124-201ENSMUST00000204159 472 ntBASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm15770-201ENSMUST00000117498 584 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm42612-201ENSMUST00000197986 623 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm43170-201ENSMUST00000199827 612 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm6218-201ENSMUST00000219812 628 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms