Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gm13315-201ENSMUST00000120376 991 ntBASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Rmrp-201ENSMUST00000157463 271 ntBASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gm10076-201ENSMUST00000073238 384 ntBASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Mir433-201ENSMUST00000093564 124 ntBASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 AA914427-201ENSMUST00000193194 1166 ntBASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Gm8712-201ENSMUST00000221090 701 ntBASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcb1Q9Z0H3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Gm10312-201ENSMUST00000078515 489 ntBASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms