Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Scn8aQ9WTU3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scn8aQ9WTU3 Gm24934-201ENSMUST00000103764 111 ntBASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Mir877-201ENSMUST00000104738 85 ntBASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm44967-201ENSMUST00000207047 631 ntBASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms