Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.34□□□□□ -0.59
Nubp2Q9R061 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.34□□□□□ -0.59
Nubp2Q9R061 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nubp2Q9R061 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Nubp2Q9R061 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.33□□□□□ -0.6
Nubp2Q9R061 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.33□□□□□ -0.6
Nubp2Q9R061 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Gm40466-201ENSMUST00000212174 422 ntBASIC11.33□□□□□ -0.6
Nubp2Q9R061 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.33□□□□□ -0.6
Nubp2Q9R061 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.33□□□□□ -0.6
Nubp2Q9R061 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nubp2Q9R061 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.32□□□□□ -0.6
Nubp2Q9R061 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.32□□□□□ -0.6
Nubp2Q9R061 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm27331-201ENSMUST00000183705 60 ntBASIC11.32□□□□□ -0.6
Nubp2Q9R061 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.32□□□□□ -0.6
Nubp2Q9R061 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.32□□□□□ -0.6
Nubp2Q9R061 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.32□□□□□ -0.6
Nubp2Q9R061 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.32□□□□□ -0.6
Nubp2Q9R061 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.32□□□□□ -0.6
Nubp2Q9R061 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms