Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.07□□□□□ -0.48
SrfQ9JM73 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SrfQ9JM73 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.06□□□□□ -0.48
SrfQ9JM73 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Gm25109-201ENSMUST00000122474 114 ntBASIC12.06□□□□□ -0.48
SrfQ9JM73 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.06□□□□□ -0.48
SrfQ9JM73 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Gm37666-201ENSMUST00000194110 866 ntBASIC12.06□□□□□ -0.48
SrfQ9JM73 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Gm44607-201ENSMUST00000205611 1090 ntBASIC12.06□□□□□ -0.48
SrfQ9JM73 Gm39404-201ENSMUST00000216350 313 ntBASIC12.06□□□□□ -0.48
SrfQ9JM73 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.06□□□□□ -0.48
SrfQ9JM73 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SrfQ9JM73 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SrfQ9JM73 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SrfQ9JM73 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.05□□□□□ -0.48
SrfQ9JM73 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Gm28071-201ENSMUST00000190355 478 ntBASIC12.05□□□□□ -0.48
SrfQ9JM73 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Gm45118-201ENSMUST00000208928 825 ntBASIC12.05□□□□□ -0.48
SrfQ9JM73 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SrfQ9JM73 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC12.05□□□□□ -0.48
SrfQ9JM73 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.05□□□□□ -0.48
SrfQ9JM73 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
SrfQ9JM73 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms