Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gm4984-201ENSMUST00000115987 360 ntBASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gm12390-201ENSMUST00000117897 397 ntBASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gm14127-201ENSMUST00000117906 678 ntBASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gm27486-201ENSMUST00000184923 80 ntBASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gm6091-201ENSMUST00000098307 165 ntBASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61a2Q9JLR1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Paupar-201ENSMUST00000194826 3482 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm11814-201ENSMUST00000119515 929 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm43433-201ENSMUST00000196573 481 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm6266-201ENSMUST00000203844 806 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm7561-201ENSMUST00000211203 886 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61a2Q9JLR1 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Gm13829-201ENSMUST00000119600 138 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms