Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ddx47Q9CWX9 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Gm35960-201ENSMUST00000202712 767 ntBASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Gm19078-201ENSMUST00000206311 727 ntBASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx47Q9CWX9 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Gm8227-201ENSMUST00000223306 571 ntBASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx47Q9CWX9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms