Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim11Q99PQ2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim11Q99PQ2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim11Q99PQ2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim11Q99PQ2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim11Q99PQ2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim11Q99PQ2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gm24644-201ENSMUST00000157114 139 ntBASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gm4271-201ENSMUST00000174444 973 ntBASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gm27331-201ENSMUST00000183705 60 ntBASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gm29705-201ENSMUST00000212598 474 ntBASIC14.49□□□□□ -0.09
Trim11Q99PQ2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gm26035-201ENSMUST00000083065 308 ntBASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim11Q99PQ2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms