Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Gm14274-201ENSMUST00000117182 615 ntBASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Mir6407-201ENSMUST00000184510 101 ntBASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Gm43912-201ENSMUST00000204352 538 ntBASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh15Q99PJ1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Gm5451-201ENSMUST00000080545 579 ntBASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh15Q99PJ1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm19587-201ENSMUST00000191395 545 ntBASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm42779-201ENSMUST00000198807 406 ntBASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm8894-201ENSMUST00000074642 666 ntBASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.01□□□□□ -0.17
Pcdh15Q99PJ1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh15Q99PJ1 Gm25063-201ENSMUST00000104666 94 ntBASIC14□□□□□ -0.17
Pcdh15Q99PJ1 Gm12948-201ENSMUST00000119406 682 ntBASIC14□□□□□ -0.17
Pcdh15Q99PJ1 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14□□□□□ -0.17
Pcdh15Q99PJ1 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14□□□□□ -0.17
Pcdh15Q99PJ1 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms