Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Gm26035-201ENSMUST00000083065 308 ntBASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk5rap3Q99LM2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Matn2-203ENSMUST00000226766 3252 ntBASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Gm13612-201ENSMUST00000119276 390 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms