Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lims1Q99JW4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lims1Q99JW4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lims1Q99JW4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lims1Q99JW4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Gm11618-201ENSMUST00000117946 267 ntBASIC11.6□□□□□ -0.55
Lims1Q99JW4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.6□□□□□ -0.55
Lims1Q99JW4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.6□□□□□ -0.55
Lims1Q99JW4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Lims1Q99JW4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lims1Q99JW4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Snord83b-201ENSMUST00000104546 94 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Gm16296-201ENSMUST00000159905 325 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lims1Q99JW4 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.59□□□□□ -0.55
Lims1Q99JW4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lims1Q99JW4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms