Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm11278-201ENSMUST00000121002 997 ntBASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm18012-201ENSMUST00000204558 773 ntBASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm44585-201ENSMUST00000207150 607 ntBASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm5564-201ENSMUST00000034916 967 ntBASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm16372-201ENSMUST00000073088 450 ntBASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Pcdhb20Q91XZ9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Pcdhb20Q91XZ9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdhb20Q91XZ9 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.83□□□□□ -0.35
Pcdhb20Q91XZ9 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.83□□□□□ -0.35
Pcdhb20Q91XZ9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdhb20Q91XZ9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Pcdhb20Q91XZ9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm8213-201ENSMUST00000118191 441 ntBASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm26401-201ENSMUST00000158502 76 ntBASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm24196-201ENSMUST00000179161 110 ntBASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm27025-201ENSMUST00000182392 942 ntBASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm29649-201ENSMUST00000185649 419 ntBASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 AC123835.1-201ENSMUST00000214362 670 ntBASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Olfr749-202ENSMUST00000214290 1330 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb20Q91XZ9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb20Q91XZ9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms