Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gm13226-201ENSMUST00000117838 404 ntBASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gm14660-201ENSMUST00000119809 575 ntBASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gm11964-201ENSMUST00000120982 444 ntBASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gm9630-201ENSMUST00000178304 885 ntBASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gm6222-202ENSMUST00000182143 629 ntBASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gm27731-201ENSMUST00000185192 107 ntBASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb6Q91XZ4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Gm13492-201ENSMUST00000119772 665 ntBASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Gm25261-201ENSMUST00000157416 134 ntBASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Gm25927-201ENSMUST00000175058 117 ntBASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Gm45784-201ENSMUST00000188360 142 ntBASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb6Q91XZ4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb6Q91XZ4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb6Q91XZ4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb6Q91XZ4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb6Q91XZ4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb6Q91XZ4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb6Q91XZ4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb6Q91XZ4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb6Q91XZ4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms