Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp3Q91W36 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.18□□□□□ -0.3
Usp3Q91W36 Gm29396-201ENSMUST00000185659 716 ntBASIC13.18□□□□□ -0.3
Usp3Q91W36 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp3Q91W36 Gm18935-201ENSMUST00000212692 664 ntBASIC13.18□□□□□ -0.3
Usp3Q91W36 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.18□□□□□ -0.3
Usp3Q91W36 Gm7046-201ENSMUST00000221351 977 ntBASIC13.18□□□□□ -0.3
Usp3Q91W36 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp3Q91W36 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp3Q91W36 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Usp3Q91W36 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp3Q91W36 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp3Q91W36 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp3Q91W36 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp3Q91W36 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp3Q91W36 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.18□□□□□ -0.3
Usp3Q91W36 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp3Q91W36 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp3Q91W36 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp3Q91W36 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Usp3Q91W36 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp3Q91W36 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Daam2-202ENSMUST00000224595 1926 ntBASIC13.17□□□□□ -0.3
Usp3Q91W36 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm43980-201ENSMUST00000204899 1612 ntBASIC13.17□□□□□ -0.3
Usp3Q91W36 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Usp3Q91W36 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Usp3Q91W36 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp3Q91W36 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm13492-201ENSMUST00000119772 665 ntBASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm13297-201ENSMUST00000120205 934 ntBASIC13.17□□□□□ -0.3
Usp3Q91W36 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp3Q91W36 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Usp3Q91W36 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp3Q91W36 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.17□□□□□ -0.3
Usp3Q91W36 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.17□□□□□ -0.3
Usp3Q91W36 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp3Q91W36 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Usp3Q91W36 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.16□□□□□ -0.3
Usp3Q91W36 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Usp3Q91W36 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Usp3Q91W36 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.16□□□□□ -0.3
Usp3Q91W36 Gm22709-201ENSMUST00000116893 111 ntBASIC13.16□□□□□ -0.3
Usp3Q91W36 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Usp3Q91W36 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Gm5656-201ENSMUST00000171020 1096 ntBASIC13.16□□□□□ -0.3
Usp3Q91W36 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Gm27516-201ENSMUST00000184237 98 ntBASIC13.16□□□□□ -0.3
Usp3Q91W36 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Ighv10-4-201ENSMUST00000193702 299 ntBASIC13.16□□□□□ -0.3
Usp3Q91W36 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC13.16□□□□□ -0.3
Usp3Q91W36 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp3Q91W36 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp3Q91W36 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.16□□□□□ -0.3
Usp3Q91W36 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.16□□□□□ -0.3
Usp3Q91W36 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp3Q91W36 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms