Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Gm9368-201ENSMUST00000219348 831 ntBASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx41Q91VN6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm13350-201ENSMUST00000120519 479 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm43758-201ENSMUST00000199500 367 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm10608-202ENSMUST00000213924 676 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Gm8227-201ENSMUST00000223306 571 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ddx41Q91VN6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Gm3890-201ENSMUST00000182416 207 ntBASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Gm37042-201ENSMUST00000193816 581 ntBASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ddx41Q91VN6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms