Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.16□□□□□ -0.3
Trim60Q8VI40 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim60Q8VI40 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Gm8099-201ENSMUST00000200510 742 ntBASIC13.15□□□□□ -0.3
Trim60Q8VI40 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim60Q8VI40 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.15□□□□□ -0.31
Trim60Q8VI40 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Trim60Q8VI40 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Gm27437-201ENSMUST00000183429 107 ntBASIC13.14□□□□□ -0.31
Trim60Q8VI40 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Gm38671-201ENSMUST00000200573 130 ntBASIC13.14□□□□□ -0.31
Trim60Q8VI40 Gm45668-201ENSMUST00000211271 493 ntBASIC13.14□□□□□ -0.31
Trim60Q8VI40 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.14□□□□□ -0.31
Trim60Q8VI40 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.14□□□□□ -0.31
Trim60Q8VI40 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim60Q8VI40 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.13□□□□□ -0.31
Trim60Q8VI40 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.13□□□□□ -0.31
Trim60Q8VI40 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.13□□□□□ -0.31
Trim60Q8VI40 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Gm13612-201ENSMUST00000119276 390 ntBASIC13.13□□□□□ -0.31
Trim60Q8VI40 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms