Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm27331-201ENSMUST00000183705 60 ntBASIC12.84□□□□□ -0.35
Clip4Q8CI96 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.84□□□□□ -0.35
Clip4Q8CI96 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.84□□□□□ -0.35
Clip4Q8CI96 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.84□□□□□ -0.35
Clip4Q8CI96 Gm45841-201ENSMUST00000207700 164 ntBASIC12.84□□□□□ -0.35
Clip4Q8CI96 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.84□□□□□ -0.35
Clip4Q8CI96 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clip4Q8CI96 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Clip4Q8CI96 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.83□□□□□ -0.35
Clip4Q8CI96 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Gm12203-201ENSMUST00000118235 598 ntBASIC12.83□□□□□ -0.36
Clip4Q8CI96 Gm12209-201ENSMUST00000120089 596 ntBASIC12.83□□□□□ -0.36
Clip4Q8CI96 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Gm45784-201ENSMUST00000188360 142 ntBASIC12.83□□□□□ -0.36
Clip4Q8CI96 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.83□□□□□ -0.36
Clip4Q8CI96 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.83□□□□□ -0.36
Clip4Q8CI96 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clip4Q8CI96 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.83□□□□□ -0.36
Clip4Q8CI96 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Clip4Q8CI96 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.83□□□□□ -0.36
Clip4Q8CI96 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clip4Q8CI96 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Gm27731-201ENSMUST00000185192 107 ntBASIC12.82□□□□□ -0.36
Clip4Q8CI96 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 AY702102-202ENSMUST00000194651 1173 ntBASIC12.82□□□□□ -0.36
Clip4Q8CI96 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Gm43818-201ENSMUST00000200605 466 ntBASIC12.82□□□□□ -0.36
Clip4Q8CI96 Gm29705-201ENSMUST00000212598 474 ntBASIC12.82□□□□□ -0.36
Clip4Q8CI96 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.82□□□□□ -0.36
Clip4Q8CI96 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.82□□□□□ -0.36
Clip4Q8CI96 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clip4Q8CI96 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms