Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Gm8598-201ENSMUST00000221184 836 ntBASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Gm12291-201ENSMUST00000121627 311 ntBASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Proscos-202ENSMUST00000178990 666 ntBASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vcpip1Q8CDG3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Gm44124-201ENSMUST00000204159 472 ntBASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vcpip1Q8CDG3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms