Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 AC167013.1-201ENSMUST00000228592 202 ntBASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Daam2-202ENSMUST00000224595 1926 ntBASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm24548-201ENSMUST00000158650 108 ntBASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm38158-201ENSMUST00000194617 339 ntBASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm10478-201ENSMUST00000084451 396 ntBASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc60Q8C4J0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Gm6023-201ENSMUST00000118217 606 ntBASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Gm13492-201ENSMUST00000119772 665 ntBASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Gm22058-201ENSMUST00000083393 310 ntBASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc60Q8C4J0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc60Q8C4J0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc60Q8C4J0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc60Q8C4J0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ccdc60Q8C4J0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc60Q8C4J0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms