Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Gm16570-201ENSMUST00000161951 436 ntBASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Gm27023-201ENSMUST00000182372 285 ntBASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Gm18827-201ENSMUST00000188341 790 ntBASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Gm8712-201ENSMUST00000221090 701 ntBASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sh3rf2Q8BZT2 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.9□□□□□ -0.35
Sh3rf2Q8BZT2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.9□□□□□ -0.35
Sh3rf2Q8BZT2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sh3rf2Q8BZT2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sh3rf2Q8BZT2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Gm14109-201ENSMUST00000118814 309 ntBASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 AA914427-201ENSMUST00000193194 1166 ntBASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf2Q8BZT2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf2Q8BZT2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms