Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Gm15276-201ENSMUST00000145953 498 ntBASIC17.87■□□□□ 0.45
Usp47Q8BY87 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp47Q8BY87 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Gm43721-201ENSMUST00000199677 2313 ntBASIC17.86■□□□□ 0.45
Usp47Q8BY87 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Gm15236-201ENSMUST00000117309 379 ntBASIC17.86■□□□□ 0.45
Usp47Q8BY87 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Mir3102-201ENSMUST00000175555 104 ntBASIC17.86■□□□□ 0.45
Usp47Q8BY87 Gm44967-201ENSMUST00000207047 631 ntBASIC17.86■□□□□ 0.45
Usp47Q8BY87 Gm45224-201ENSMUST00000208203 414 ntBASIC17.86■□□□□ 0.45
Usp47Q8BY87 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp47Q8BY87 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.86■□□□□ 0.45
Usp47Q8BY87 Gm43570-201ENSMUST00000199951 3688 ntBASIC17.85■□□□□ 0.45
Usp47Q8BY87 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Gm18227-201ENSMUST00000211082 1468 ntBASIC17.85■□□□□ 0.45
Usp47Q8BY87 Gm10782-202ENSMUST00000223775 1480 ntBASIC17.85■□□□□ 0.45
Usp47Q8BY87 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC17.85■□□□□ 0.45
Usp47Q8BY87 Gm13665-201ENSMUST00000120830 528 ntBASIC17.85■□□□□ 0.45
Usp47Q8BY87 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Gm5869-201ENSMUST00000200248 1257 ntBASIC17.85■□□□□ 0.45
Usp47Q8BY87 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.85■□□□□ 0.45
Usp47Q8BY87 AC161537.1-201ENSMUST00000226199 1015 ntBASIC17.85■□□□□ 0.45
Usp47Q8BY87 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp47Q8BY87 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC17.84■□□□□ 0.45
Usp47Q8BY87 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC17.84■□□□□ 0.45
Usp47Q8BY87 AC123857.2-201ENSMUST00000225756 1582 ntBASIC17.84■□□□□ 0.45
Usp47Q8BY87 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms