Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Gm38671-201ENSMUST00000200573 130 ntBASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Gm9908-201ENSMUST00000211534 448 ntBASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.34□□□□□ -0.27
Ccdc40Q8BI79 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc40Q8BI79 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.33□□□□□ -0.27
Ccdc40Q8BI79 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc40Q8BI79 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc40Q8BI79 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc40Q8BI79 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc40Q8BI79 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc40Q8BI79 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc40Q8BI79 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms