Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm45638-201ENSMUST00000211507 2878 ntBASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Prrxl1-205ENSMUST00000228878 723 ntBASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.23■□□□□ 0.67
Slx4Q6P1D7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Gm3052-202ENSMUST00000188254 2224 ntBASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Gm20392-201ENSMUST00000173047 701 ntBASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Gm28324-201ENSMUST00000187913 264 ntBASIC19.22■□□□□ 0.67
Slx4Q6P1D7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Gm44158-201ENSMUST00000203881 505 ntBASIC19.22■□□□□ 0.67
Slx4Q6P1D7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Gm44065-201ENSMUST00000203184 3527 ntBASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Slx4Q6P1D7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Gm15352-201ENSMUST00000118696 270 ntBASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Gm13937-201ENSMUST00000121000 988 ntBASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slx4Q6P1D7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Gm22711-201ENSMUST00000116890 133 ntBASIC19.2■□□□□ 0.66
Slx4Q6P1D7 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Gm21092-201ENSMUST00000178995 955 ntBASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Gm9873-201ENSMUST00000063891 1097 ntBASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Mirlet7i-201ENSMUST00000083472 85 ntBASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Retreg1-206ENSMUST00000228306 1430 ntBASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slx4Q6P1D7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms