Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Gm23363-201ENSMUST00000175024 79 ntBASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sp140Q6NSQ5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Gm8099-201ENSMUST00000200510 742 ntBASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Gm19163-201ENSMUST00000223313 780 ntBASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sp140Q6NSQ5 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sp140Q6NSQ5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sp140Q6NSQ5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Sp140Q6NSQ5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms