Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Gm6218-201ENSMUST00000219812 628 ntBASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tpm4Q6IRU2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gm44855-201ENSMUST00000205725 362 ntBASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm4Q6IRU2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms