Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gli3Q61602 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Gli3Q61602 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.68■□□□□ 0.26
Gli3Q61602 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gli3Q61602 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gli3Q61602 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gli3Q61602 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.68■□□□□ 0.26
Gli3Q61602 Gm18210-201ENSMUST00000209001 1524 ntBASIC16.68■□□□□ 0.26
Gli3Q61602 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gli3Q61602 Gm14270-201ENSMUST00000118388 846 ntBASIC16.68■□□□□ 0.26
Gli3Q61602 Gm5419-201ENSMUST00000119301 527 ntBASIC16.68■□□□□ 0.26
Gli3Q61602 Gm16459-201ENSMUST00000121443 686 ntBASIC16.68■□□□□ 0.26
Gli3Q61602 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gli3Q61602 Gm25226-201ENSMUST00000158198 123 ntBASIC16.68■□□□□ 0.26
Gli3Q61602 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gli3Q61602 Gm9136-201ENSMUST00000193368 454 ntBASIC16.68■□□□□ 0.26
Gli3Q61602 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gli3Q61602 AC164618.2-201ENSMUST00000224770 573 ntBASIC16.68■□□□□ 0.26
Gli3Q61602 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gli3Q61602 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gli3Q61602 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gli3Q61602 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Gm38344-201ENSMUST00000195306 1353 ntBASIC16.67■□□□□ 0.26
Gli3Q61602 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Gli3Q61602 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC16.67■□□□□ 0.26
Gli3Q61602 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Gli3Q61602 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.67■□□□□ 0.26
Gli3Q61602 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.67■□□□□ 0.26
Gli3Q61602 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC16.67■□□□□ 0.26
Gli3Q61602 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Gm22379-201ENSMUST00000157480 131 ntBASIC16.67■□□□□ 0.26
Gli3Q61602 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.67■□□□□ 0.26
Gli3Q61602 Gm34379-201ENSMUST00000195036 290 ntBASIC16.67■□□□□ 0.26
Gli3Q61602 Gm7238-201ENSMUST00000206467 973 ntBASIC16.67■□□□□ 0.26
Gli3Q61602 Gm39288-201ENSMUST00000210554 446 ntBASIC16.67■□□□□ 0.26
Gli3Q61602 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gli3Q61602 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Gli3Q61602 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.66■□□□□ 0.26
Gli3Q61602 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Gli3Q61602 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC16.66■□□□□ 0.26
Gli3Q61602 Gm25677-201ENSMUST00000174983 72 ntBASIC16.66■□□□□ 0.26
Gli3Q61602 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Gli3Q61602 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC16.66■□□□□ 0.26
Gli3Q61602 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Gli3Q61602 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
Gli3Q61602 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli3Q61602 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gli3Q61602 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC16.65■□□□□ 0.26
Gli3Q61602 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Gm7627-201ENSMUST00000183205 999 ntBASIC16.65■□□□□ 0.26
Gli3Q61602 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Gli3Q61602 AC154759.1-201ENSMUST00000224137 1159 ntBASIC16.65■□□□□ 0.26
Gli3Q61602 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC16.65■□□□□ 0.26
Gli3Q61602 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gli3Q61602 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gli3Q61602 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Gli3Q61602 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli3Q61602 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms