Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ift88Q61371 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.06□□□□□ -0.16
Ift88Q61371 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.06□□□□□ -0.16
Ift88Q61371 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.06□□□□□ -0.16
Ift88Q61371 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ift88Q61371 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ift88Q61371 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.06□□□□□ -0.16
Ift88Q61371 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ift88Q61371 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
Ift88Q61371 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.05□□□□□ -0.16
Ift88Q61371 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Ift88Q61371 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.05□□□□□ -0.16
Ift88Q61371 Gm14921-201ENSMUST00000118643 908 ntBASIC14.05□□□□□ -0.16
Ift88Q61371 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.05□□□□□ -0.16
Ift88Q61371 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.05□□□□□ -0.16
Ift88Q61371 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.05□□□□□ -0.16
Ift88Q61371 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.05□□□□□ -0.16
Ift88Q61371 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.05□□□□□ -0.16
Ift88Q61371 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ift88Q61371 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Gm15823-201ENSMUST00000064305 670 ntBASIC14.05□□□□□ -0.16
Ift88Q61371 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.05□□□□□ -0.16
Ift88Q61371 Daam2-202ENSMUST00000224595 1926 ntBASIC14.05□□□□□ -0.16
Ift88Q61371 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ift88Q61371 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.04□□□□□ -0.16
Ift88Q61371 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.04□□□□□ -0.16
Ift88Q61371 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ift88Q61371 Gm14704-201ENSMUST00000120300 874 ntBASIC14.04□□□□□ -0.16
Ift88Q61371 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.04□□□□□ -0.16
Ift88Q61371 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.04□□□□□ -0.16
Ift88Q61371 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Gm19184-201ENSMUST00000196798 928 ntBASIC14.04□□□□□ -0.16
Ift88Q61371 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.04□□□□□ -0.16
Ift88Q61371 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.04□□□□□ -0.16
Ift88Q61371 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ift88Q61371 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ift88Q61371 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.04□□□□□ -0.16
Ift88Q61371 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.04□□□□□ -0.16
Ift88Q61371 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ift88Q61371 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ift88Q61371 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Ift88Q61371 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.03□□□□□ -0.16
Ift88Q61371 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Ift88Q61371 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Ift88Q61371 Gm7488-201ENSMUST00000117148 684 ntBASIC14.03□□□□□ -0.16
Ift88Q61371 Gm8805-201ENSMUST00000117848 313 ntBASIC14.03□□□□□ -0.16
Ift88Q61371 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ift88Q61371 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms