Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm26927-201ENSMUST00000182385 965 ntBASIC12.24□□□□□ -0.45
ClpbQ60649 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ClpbQ60649 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.24□□□□□ -0.45
ClpbQ60649 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.24□□□□□ -0.45
ClpbQ60649 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.24□□□□□ -0.45
ClpbQ60649 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ClpbQ60649 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Gm10478-201ENSMUST00000084451 396 ntBASIC12.24□□□□□ -0.45
ClpbQ60649 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.23□□□□□ -0.45
ClpbQ60649 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.23□□□□□ -0.45
ClpbQ60649 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ClpbQ60649 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.23□□□□□ -0.45
ClpbQ60649 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ClpbQ60649 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.23□□□□□ -0.45
ClpbQ60649 Gm8805-201ENSMUST00000117848 313 ntBASIC12.23□□□□□ -0.45
ClpbQ60649 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.23□□□□□ -0.45
ClpbQ60649 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.23□□□□□ -0.45
ClpbQ60649 Gm26185-201ENSMUST00000157692 266 ntBASIC12.23□□□□□ -0.45
ClpbQ60649 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.23□□□□□ -0.45
ClpbQ60649 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ClpbQ60649 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ClpbQ60649 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.23□□□□□ -0.45
ClpbQ60649 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ClpbQ60649 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ClpbQ60649 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ClpbQ60649 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
ClpbQ60649 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
ClpbQ60649 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ClpbQ60649 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ClpbQ60649 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ClpbQ60649 Gm11978-201ENSMUST00000122315 466 ntBASIC12.22□□□□□ -0.45
ClpbQ60649 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.22□□□□□ -0.45
ClpbQ60649 Gm27514-201ENSMUST00000183692 110 ntBASIC12.22□□□□□ -0.45
ClpbQ60649 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.22□□□□□ -0.45
ClpbQ60649 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ClpbQ60649 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ClpbQ60649 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.22□□□□□ -0.45
ClpbQ60649 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ClpbQ60649 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
ClpbQ60649 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ClpbQ60649 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms