Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm17208-201ENSMUST00000168388 535 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Gm5035-201ENSMUST00000215581 927 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Mir339-201ENSMUST00000083659 96 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm27847-201ENSMUST00000183711 107 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm27375-201ENSMUST00000183799 107 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav5d-4Q5R1F6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gm24644-201ENSMUST00000157114 139 ntBASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gm27331-201ENSMUST00000183705 60 ntBASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav5d-4Q5R1F6 Gm29705-201ENSMUST00000212598 474 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms