Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Mir686-201ENSMUST00000102174 109 ntBASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm11978-201ENSMUST00000122315 466 ntBASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm26035-201ENSMUST00000083065 308 ntBASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms