Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gm13597-201ENSMUST00000121239 375 ntBASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Mir6982-201ENSMUST00000184354 68 ntBASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gm7461-201ENSMUST00000058918 827 ntBASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Gm5177-201ENSMUST00000183092 997 ntBASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Mir125a-201ENSMUST00000083545 68 ntBASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cks1brtQ3UNC9 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms