Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upf3aQ3ULJ3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upf3aQ3ULJ3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upf3aQ3ULJ3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Gm22334-201ENSMUST00000158070 133 ntBASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Gm17040-202ENSMUST00000170597 889 ntBASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Gm19187-201ENSMUST00000206781 892 ntBASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Gm8959-201ENSMUST00000213150 571 ntBASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upf3aQ3ULJ3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Gm14644-201ENSMUST00000116671 647 ntBASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Gm15703-201ENSMUST00000120250 880 ntBASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Gm24514-201ENSMUST00000174961 285 ntBASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Gm17812-201ENSMUST00000204935 318 ntBASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Upf3aQ3ULJ3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Gm12266-201ENSMUST00000120311 962 ntBASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Gm20426-201ENSMUST00000173657 440 ntBASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Upf3aQ3ULJ3 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms