Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm11836-201ENSMUST00000121022 441 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm3726-201ENSMUST00000203110 785 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm43912-201ENSMUST00000204352 538 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm5599-201ENSMUST00000209602 788 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm11989-201ENSMUST00000117240 672 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm11362-201ENSMUST00000118838 850 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm8343-201ENSMUST00000182705 994 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm29304-201ENSMUST00000186555 695 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm29223-201ENSMUST00000188867 695 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Gm37921-201ENSMUST00000194333 695 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Gm22711-201ENSMUST00000116890 133 ntBASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Gm22388-201ENSMUST00000158194 248 ntBASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.63□□□□□ -0.55
Spg11Q3UHA3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Gm23680-201ENSMUST00000083162 164 ntBASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.63□□□□□ -0.55
Spg11Q3UHA3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Spg11Q3UHA3 Gm8451-201ENSMUST00000170338 447 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm18968-201ENSMUST00000221319 862 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm7536-201ENSMUST00000077389 444 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm5453-201ENSMUST00000080866 447 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Gm26448-201ENSMUST00000082446 203 ntBASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Spg11Q3UHA3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms