Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Gm14350-201ENSMUST00000116642 640 ntBASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Gm12490-201ENSMUST00000120255 560 ntBASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.51□□□□□ -0.25
Trim43aQ3TL54 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Gm18624-201ENSMUST00000220966 658 ntBASIC13.51□□□□□ -0.25
Trim43aQ3TL54 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43aQ3TL54 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Paupar-201ENSMUST00000194826 3482 ntBASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Gm14928-201ENSMUST00000120198 477 ntBASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Gm12291-201ENSMUST00000121627 311 ntBASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Mir6392-201ENSMUST00000184924 108 ntBASIC13.5□□□□□ -0.25
Trim43aQ3TL54 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Gm6458-201ENSMUST00000211573 635 ntBASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43aQ3TL54 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Gm16202-201ENSMUST00000117532 544 ntBASIC13.49□□□□□ -0.25
Trim43aQ3TL54 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms