Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Gm7063-201ENSMUST00000186840 981 ntBASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cul4aQ3TCH7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Gm37497-201ENSMUST00000195830 798 ntBASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cul4aQ3TCH7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.33□□□□□ -0.27
Cul4aQ3TCH7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cul4aQ3TCH7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Gm11803-201ENSMUST00000119966 444 ntBASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Gm18018-201ENSMUST00000198273 408 ntBASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Gm10012-201ENSMUST00000078252 192 ntBASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cul4aQ3TCH7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms