Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.22□□□□□ -0.45
Hoxc4Q08624 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hoxc4Q08624 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.21□□□□□ -0.45
Hoxc4Q08624 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Gm14017-201ENSMUST00000121934 386 ntBASIC12.21□□□□□ -0.45
Hoxc4Q08624 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.21□□□□□ -0.45
Hoxc4Q08624 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.21□□□□□ -0.45
Hoxc4Q08624 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.21□□□□□ -0.45
Hoxc4Q08624 Gm45186-201ENSMUST00000206874 478 ntBASIC12.21□□□□□ -0.45
Hoxc4Q08624 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.21□□□□□ -0.45
Hoxc4Q08624 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hoxc4Q08624 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc4Q08624 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.21□□□□□ -0.46
Hoxc4Q08624 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Hoxc4Q08624 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Hoxc4Q08624 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc4Q08624 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc4Q08624 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc4Q08624 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc4Q08624 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Hoxc4Q08624 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc4Q08624 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc4Q08624 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.21□□□□□ -0.46
Hoxc4Q08624 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm14644-201ENSMUST00000116671 647 ntBASIC12.2□□□□□ -0.46
Hoxc4Q08624 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm14760-201ENSMUST00000121831 999 ntBASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm26361-201ENSMUST00000158868 186 ntBASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm9022-201ENSMUST00000182482 992 ntBASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm44651-201ENSMUST00000207343 372 ntBASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm18212-201ENSMUST00000211678 889 ntBASIC12.2□□□□□ -0.46
Hoxc4Q08624 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Hoxc4Q08624 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms