Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Gm13689-201ENSMUST00000119360 685 ntBASIC12.97□□□□□ -0.33
Thumpd3P97770 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.97□□□□□ -0.33
Thumpd3P97770 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.97□□□□□ -0.33
Thumpd3P97770 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Thumpd3P97770 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.97□□□□□ -0.33
Thumpd3P97770 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Thumpd3P97770 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.97□□□□□ -0.33
Thumpd3P97770 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Thumpd3P97770 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.97□□□□□ -0.33
Thumpd3P97770 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.97□□□□□ -0.33
Thumpd3P97770 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.97□□□□□ -0.33
Thumpd3P97770 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.96□□□□□ -0.33
Thumpd3P97770 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Thumpd3P97770 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Gm15371-201ENSMUST00000117057 784 ntBASIC12.96□□□□□ -0.33
Thumpd3P97770 Gm12390-201ENSMUST00000117897 397 ntBASIC12.96□□□□□ -0.33
Thumpd3P97770 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Thumpd3P97770 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.96□□□□□ -0.33
Thumpd3P97770 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.96□□□□□ -0.33
Thumpd3P97770 Gm8463-201ENSMUST00000208573 613 ntBASIC12.96□□□□□ -0.33
Thumpd3P97770 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Thumpd3P97770 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.96□□□□□ -0.33
Thumpd3P97770 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Thumpd3P97770 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd3P97770 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Thumpd3P97770 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Thumpd3P97770 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Thumpd3P97770 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Thumpd3P97770 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Thumpd3P97770 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Thumpd3P97770 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Thumpd3P97770 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Thumpd3P97770 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.95□□□□□ -0.34
Thumpd3P97770 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.95□□□□□ -0.34
Thumpd3P97770 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.95□□□□□ -0.34
Thumpd3P97770 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.95□□□□□ -0.34
Thumpd3P97770 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Thumpd3P97770 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Thumpd3P97770 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.95□□□□□ -0.34
Thumpd3P97770 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.95□□□□□ -0.34
Thumpd3P97770 Mir1982-201ENSMUST00000157368 74 ntBASIC12.95□□□□□ -0.34
Thumpd3P97770 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.95□□□□□ -0.34
Thumpd3P97770 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Thumpd3P97770 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.95□□□□□ -0.34
Thumpd3P97770 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Thumpd3P97770 AY702102-202ENSMUST00000194651 1173 ntBASIC12.95□□□□□ -0.34
Thumpd3P97770 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.95□□□□□ -0.34
Thumpd3P97770 Gm7287-201ENSMUST00000205267 602 ntBASIC12.95□□□□□ -0.34
Thumpd3P97770 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.95□□□□□ -0.34
Thumpd3P97770 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Thumpd3P97770 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd3P97770 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms